BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034A07LP1|AL429837
(908 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1625 1739 0.0
3x_Contig1746 145 2e-34
3x_Contig1671 145 2e-34
3x_Contig1276 145 2e-34
3x_Contig384 145 2e-34
>3x_Contig1625
Length = 13618
Score = 1739 bits (877), Expect = 0.0
Identities = 903/909 (99%), Gaps = 2/909 (0%)
Strand = Plus / Plus
Query: 1 actggagttaccattactgtagttatcgcgaaagtgtacgaattatcatgtcagacaata 60
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 7771 actggagtaaccattactgtagtaatcgcgaaagtgtacgaattatcatgtcagacaata 7830
Query: 61 cagcagaacagcaggatatacagatcaagggtaagcccgtgagtggccgcacctggaagg 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 7831 cagcagaacagcaggatatacagatcaagggtaagcccgttagtggccgcacctggaagg 7890
Query: 121 tagagaaagaacctttgagggctaagaacagagtggtgaagaataagaagttgacctcat 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 7891 tagagaaagaacctttgagggctaagaacagagtcgtgaagaataagaagttgacctcat 7950
Query: 181 gggaattgaagaaacaaaagagactagaagatcagcagttcaaggaaaaggtacgtgctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7951 gggaattgaagaaacaaaagagactagaagatcagcagttcaaggaaaaggtacgtgctt 8010
Query: 241 tgaaggaggagaagaaagccgagaaagacgctgttattcaagctttgaaggaaagaagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8011 tgaaggaggagaagaaagccgagaaagacgctgttattcaagctttgaaggaaagaagag 8070
Query: 301 caaagaaggaagaacaagaaaggtacgatagattggctgccaagatgcacgctaagaagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8071 caaagaaggaagaacaagaaaggtacgatagattggctgccaagatgcacgctaagaagg 8130
Query: 361 tcgatagactaagaagaagagaaaagagaaataaggctttgaaagagcgttgagacataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8131 tcgatagactaagaagaagagaaaagagaaataaggctttgaaagagcgttgagacataa 8190
Query: 421 agtcataaatactgtataatagaataaagacatatctgcattaacgatttaggcttgttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8191 agtcataaatactgtataatagaataaagacatatctgcattaacgatttaggcttgttc 8250
Query: 481 cgtcctccgcaattgtatatactgacgatgaaaaagtatgtgggaaattgacaaaaatta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8251 cgtcctccgcaattgtatatactgacgatgaaaaagtatgtgggaaattgacaaaaatta 8310
Query: 541 aaaccaatttgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8311 aaaccaatttgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgct 8370
Query: 601 ctcccaactgagctaaagcagccaaattaattacaagaaccagttttctttcgctcacct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8371 ctcccaactgagctaaagcagccaaattaattacaagaaccagttttctttcgctcacct 8430
Query: 661 tgcactaaaattactgttatggatatttctcaatgattttctaatgatggatgtgagtgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8431 tgcactaaaattactgttatggatatttctcaatgattttctaatgatggatgtgagtgt 8490
Query: 721 c-acttaacgatagaacaggattaagtttatagtgtatgagatacgtctcggtacgctct 779
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8491 caacttaacgatagaacaggattaagtttatagtgtatgagatacgtctcggtacgctct 8550
Query: 780 gatatttcgaacggtgaatttattagtgctctgttaaaagggatcttttgctcagtgccg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8551 gatatttcgaacggtgaatttattagtgctctgttaaaagggatcttttgctcagtgccg 8610
Query: 840 ttgaaataattgaaacaatgtcaaaggatttggggagagattatccattcggataaaggc 899
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 8611 ttgaaataattgaaacaatgtcaaaggattt-gggagagattatccattcggataaaggc 8669
Query: 900 catttactg 908
|||||||||
Sbjct: 8670 catttactg 8678
>3x_Contig1746
Length = 26672
Score = 145 bits (73), Expect = 2e-34
Identities = 73/73 (100%)
Strand = Plus / Minus
Query: 550 tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12219 tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 12160
Query: 610 gagctaaagcagc 622
|||||||||||||
Sbjct: 12159 gagctaaagcagc 12147
>3x_Contig1671
Length = 12265
Score = 145 bits (73), Expect = 2e-34
Identities = 73/73 (100%)
Strand = Plus / Minus
Query: 550 tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5284 tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 5225
Query: 610 gagctaaagcagc 622
|||||||||||||
Sbjct: 5224 gagctaaagcagc 5212
>3x_Contig1276
Length = 6662
Score = 145 bits (73), Expect = 2e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 550 tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 692
Query: 610 gagctaaagcagc 622
|||||||||||||
Sbjct: 693 gagctaaagcagc 705
>3x_Contig384
Length = 1678
Score = 145 bits (73), Expect = 2e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 550 tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1446 tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 1505
Query: 610 gagctaaagcagc 622
|||||||||||||
Sbjct: 1506 gagctaaagcagc 1518
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8036
Number of Sequences: 1807
Number of extensions: 8036
Number of successful extensions: 79
Number of sequences better than 1.0e-20: 5
length of query: 908
length of database: 10,358,551
effective HSP length: 16
effective length of query: 892
effective length of database: 10,329,639
effective search space: 9214037988
effective search space used: 9214037988
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)